COSMOS/environment.yml at main · GENTEL-lab/COSMOS · GitHub

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name: cosmos
channels:
  - pypi
  - main
  - conda-forge
dependencies:
  - _libgcc_mutex=0.1
  - _openmp_mutex=5.1=1_gnu
  - biopython=1.81=*=cp37
  - ca-certificates=2023.12.12=h06a4308_0
  - certifi=2022.12.7=py37h06a4308_0
  - charset-normalizer=3.3.2=*=cp37
  - cycler=0.11.0=*=cp37
  - dgl=0.4.2=*=cp37
  - docopt=0.6.2=*=cp37
  - et_xmlfile=1.1.0=*=cp37
  - fonttools=4.38.0=*=cp37
  - goatools=1.3.1=*=cp37
  - idna=3.6=*=cp37
  - jinja2=3.1.3=*=cp37
  - joblib=1.3.2=*=cp37
  - kiwisolver=1.4.5=*=cp37
  - ld_impl_linux-64=2.38=h1181459_1
  - libffi=3.4.4=h6a678d5_0
  - libgcc-ng=11.2.0=h1234567_1
  - libgomp=11.2.0=h1234567_1
  - libstdcxx-ng=11.2.0=h1234567_1
  - lmdb=0.98=*=cp37
  - markdown-it-py=2.2.0=*=cp37
  - markupsafe=2.1.5=*=cp37
  - matplotlib=3.5.3=*=cp37
  - mdurl=0.1.2=*=cp37
  - ncurses=6.4=h6a678d5_0
  - networkx=2.6.3=*=cp37
  - numpy=1.21.6=*=cp37
  - nvidia-cublas-cu11=11.10.3.66=*=cp37
  - nvidia-cuda-nvrtc-cu11=11.7.99=*=cp37
  - nvidia-cuda-runtime-cu11=11.7.99=*=cp37
  - nvidia-cudnn-cu11=8.5.0.96=*=cp37
  - openpyxl=3.1.2=*=cp37
  - openssl=1.1.1w=h7f8727e_0
  - packaging=23.2=*=cp37
  - pandas=1.3.5=*=cp37
  - patsy=0.5.6=*=cp37
  - pillow=9.5.0=*=cp37
  - pip=22.3.1=py37h06a4308_0
  - psutil=5.9.8=*=cp37
  - pydot=2.0.0=*=cp37
  - pygments=2.17.2=*=cp37
  - pyparsing=3.1.1=*=cp37
  - python=3.7.16=h7a1cb2a_0
  - python-dateutil=2.9.0.post0=*=cp37
  - pytz=2024.1=*=cp37
  - readline=8.2=h5eee18b_0
  - requests=2.31.0=*=cp37
  - rich=13.7.1=*=cp37
  - scikit-learn=0.22.1=*=cp37
  - scipy=1.7.3=*=cp37
  - setuptools=65.6.3=py37h06a4308_0
  - six=1.16.0=*=cp37
  - sqlite=3.41.2=h5eee18b_0
  - statsmodels=0.13.5=*=cp37
  - thop=0.1.1-2209072238=*=cp37
  - tk=8.6.12=h1ccaba5_0
  - torch=1.13.1=*=cp37
  - torch-geometric=2.3.1=*=cp37
  - torchprofile=0.0.4=*=cp37
  - torchstat=0.0.7=*=cp37
  - torchsummary=1.5.1=*=cp37
  - torchvision=0.14.1=*=cp37
  - tqdm=4.66.2=*=cp37
  - typing-extensions=4.7.1=*=cp37
  - urllib3=2.0.7=*=cp37
  - wheel=0.38.4=py37h06a4308_0
  - xlsxwriter=3.2.0=*=cp37
  - xz=5.4.6=h5eee18b_0
  - zlib=1.2.13=h5eee18b_0